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  • Building Bioinformatics Solutions

    Building Bioinformatics Solutions by Bessant, Conrad; Oakley, Darren; Shadforth, Ian;

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      • Publisher's listprice GBP 63.00
      • The price is estimated because at the time of ordering we do not know what conversion rates will apply to HUF / product currency when the book arrives. In case HUF is weaker, the price increases slightly, in case HUF is stronger, the price goes lower slightly.

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    Product details:

    • Edition number 2
    • Publisher OUP Oxford
    • Date of Publication 16 January 2014

    • ISBN 9780199658565
    • Binding Paperback
    • No. of pages366 pages
    • Size 245x190x19 mm
    • Weight 702 g
    • Language English
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    Categories

    Short description:

    This book introduces the reader to all the key concepts and technologies needed to begin developing their own bioinformatics tools. The new edition includes more bioinformatics-specific content and a new chapter on good software engineering practices to help people working in teams.

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    Long description:

    Bioinformatics encompasses a broad and ever-changing range of activities involved with the management and analysis of data from molecular biology experiments. Despite the diversity of activities and applications, the basic methodology and core tools needed to tackle bioinformatics problems is common to many projects. This unique book provides an invaluable introduction to three of the main tools used in the development of bioinformatics software - Perl, R and MySQL - and explains how these can be used together to tackle the complex data-driven challenges that typify modern biology. These industry standard open source tools form the core of many bioinformatics projects, both in academia and industry. The methodologies introduced are platform independent, and all the examples that feature have been tested on Windows, Linux and Mac OS.

    Building Bioinformatics Solutions is suitable for graduate students and researchers in the life sciences who wish to automate analyses or create their own databases and web-based tools. No prior knowledge of software development is assumed. Having worked through the book, the reader should have the necessary core skills to develop computational solutions for their specific research programmes. The book will also help the reader overcome the inertia associated with penetrating this field, and provide them with the confidence and understanding required to go on to develop more advanced bioinformatics skills.

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    Table of Contents:

    Introduction
    Building Biological Databases with SQL
    Beginning Programming in Perl
    Numerical data analysis using R
    Developing Web Resources
    Software Engineering for Bioinformatics
    Appendix A: Using Command Line Interfaces
    Appendix B: Getting started with Apache HTTP Server
    Appendix C: Setting up a Linux Virtual Machine in Windows

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